Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC21.33■■□□□ 1.01
CDCA8Q53HL2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA8Q53HL2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA8Q53HL2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.33■■□□□ 1
CDCA8Q53HL2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC21.33■■□□□ 1
CDCA8Q53HL2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA8Q53HL2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.33■■□□□ 1
CDCA8Q53HL2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA8Q53HL2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC21.33■■□□□ 1
CDCA8Q53HL2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDCA8Q53HL2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 KRT8P35-201ENST00000483942 1338 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDCA8Q53HL2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.32■■□□□ 1
CDCA8Q53HL2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CDCA8Q53HL2 BCRP2-202ENST00000447763 634 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 BCRP6-201ENST00000510112 632 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 BCRP7-201ENST00000511549 544 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 HILS1-202ENST00000545329 423 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.32■■□□□ 1
CDCA8Q53HL2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.32■■□□□ 1
CDCA8Q53HL2 AC017083.2-201ENST00000608069 979 ntBASIC21.32■■□□□ 1
CDCA8Q53HL2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDCA8Q53HL2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC21.32■■□□□ 1
CDCA8Q53HL2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC21.32■■□□□ 1
CDCA8Q53HL2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.32■■□□□ 1
CDCA8Q53HL2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDCA8Q53HL2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDCA8Q53HL2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 RNU1-114P-201ENST00000365297 166 ntBASIC21.31■■□□□ 1
CDCA8Q53HL2 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.31■■□□□ 1
CDCA8Q53HL2 ATP5G2P4-201ENST00000442175 420 ntBASIC21.31■■□□□ 1
CDCA8Q53HL2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.31■■□□□ 1
CDCA8Q53HL2 IGHV3-71-201ENST00000523324 359 ntBASIC21.31■■□□□ 1
CDCA8Q53HL2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.31■■□□□ 1
CDCA8Q53HL2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.31■■□□□ 1
CDCA8Q53HL2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 AL603764.1-201ENST00000636452 321 ntBASIC21.31■■□□□ 1
CDCA8Q53HL2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDCA8Q53HL2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.31■■□□□ 1
CDCA8Q53HL2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA8Q53HL2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.31■■□□□ 1
CDCA8Q53HL2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.3■■□□□ 1
CDCA8Q53HL2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 KRT8P14-201ENST00000414254 1442 ntBASIC21.3■■□□□ 1
CDCA8Q53HL2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.3■■□□□ 1
CDCA8Q53HL2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC21.3■■□□□ 1
CDCA8Q53HL2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDCA8Q53HL2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CDCA8Q53HL2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CDCA8Q53HL2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.3■■□□□ 1
CDCA8Q53HL2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCA8Q53HL2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms