Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 CNN2P11-201ENST00000429351 262 ntBASIC14.1□□□□□ -0.15
SLC3A1Q07837 AL671277.1-201ENST00000429656 993 ntBASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 DNAJB3-202ENST00000449667 1266 ntBASIC14.1□□□□□ -0.15
SLC3A1Q07837 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 RARRES2P8-201ENST00000566335 367 ntBASIC14.1□□□□□ -0.15
SLC3A1Q07837 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC004835.2-201ENST00000603762 682 ntBASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SLC3A1Q07837 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC3A1Q07837 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 KRT8P44-201ENST00000441609 1350 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 LINC00528-201ENST00000600723 2160 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 SPDYE11-202ENST00000450699 704 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 SPDYE9P-201ENST00000570642 692 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AC026120.1-201ENST00000611536 926 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 SPDYE10P-202ENST00000612005 668 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 SPDYE8P-202ENST00000612377 668 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AC232323.1-201ENST00000540724 2099 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 REXO1L5P-201ENST00000622260 2098 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC3A1Q07837 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.09□□□□□ -0.15
SLC3A1Q07837 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC3A1Q07837 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC3A1Q07837 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC3A1Q07837 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SLC3A1Q07837 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC3A1Q07837 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC3A1Q07837 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC3A1Q07837 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms