Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.05■□□□□ -0
HMGCS1Q01581 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HMGCS1Q01581 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.05■□□□□ -0
HMGCS1Q01581 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 CICP23-201ENST00000605013 2741 ntBASIC15.04■□□□□ -0
HMGCS1Q01581 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.04■□□□□ -0
HMGCS1Q01581 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.04■□□□□ -0
HMGCS1Q01581 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.04■□□□□ -0
HMGCS1Q01581 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
HMGCS1Q01581 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 AC027612.4-201ENST00000605371 583 ntBASIC15.04■□□□□ -0
HMGCS1Q01581 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 AL136379.1-201ENST00000623471 2642 ntBASIC15.04■□□□□ -0
HMGCS1Q01581 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.04■□□□□ -0
HMGCS1Q01581 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.04■□□□□ -0
HMGCS1Q01581 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.04■□□□□ -0
HMGCS1Q01581 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCS1Q01581 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 AC099063.4-201ENST00000641099 1602 ntBASIC15.03■□□□□ -0
HMGCS1Q01581 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.03■□□□□ -0
HMGCS1Q01581 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 AL080243.2-201ENST00000418783 582 ntBASIC15.03■□□□□ -0
HMGCS1Q01581 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.03■□□□□ -0
HMGCS1Q01581 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.03■□□□□ -0
HMGCS1Q01581 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.03■□□□□ -0
HMGCS1Q01581 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.03■□□□□ -0
HMGCS1Q01581 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
HMGCS1Q01581 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCS1Q01581 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.02■□□□□ -0
HMGCS1Q01581 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCS1Q01581 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.02■□□□□ -0
HMGCS1Q01581 CETN4P-206ENST00000642099 2168 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms