Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
GABREP78334 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABREP78334 AC006449.5-201ENST00000610658 2098 ntBASIC14.77□□□□□ -0.05
GABREP78334 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABREP78334 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.76□□□□□ -0.05
GABREP78334 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.76□□□□□ -0.05
GABREP78334 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.76□□□□□ -0.05
GABREP78334 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.76□□□□□ -0.05
GABREP78334 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
GABREP78334 AL096828.3-201ENST00000615354 462 ntBASIC14.76□□□□□ -0.05
GABREP78334 BX539320.1-201ENST00000623759 877 ntBASIC14.76□□□□□ -0.05
GABREP78334 AC015967.2-201ENST00000624092 234 ntBASIC14.76□□□□□ -0.05
GABREP78334 AC006435.4-201ENST00000625037 234 ntBASIC14.76□□□□□ -0.05
GABREP78334 AL356737.1-201ENST00000634391 234 ntBASIC14.76□□□□□ -0.05
GABREP78334 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABREP78334 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 AL354989.2-201ENST00000435838 1540 ntBASIC14.76□□□□□ -0.05
GABREP78334 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.76□□□□□ -0.05
GABREP78334 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GABREP78334 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 ALOX12P2-203ENST00000570921 1945 ntBASIC14.75□□□□□ -0.05
GABREP78334 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 BX284668.4-201ENST00000453917 508 ntBASIC14.75□□□□□ -0.05
GABREP78334 UPF3AP2-201ENST00000457924 1132 ntBASIC14.75□□□□□ -0.05
GABREP78334 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.75□□□□□ -0.05
GABREP78334 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.75□□□□□ -0.05
GABREP78334 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GABREP78334 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.75□□□□□ -0.05
GABREP78334 AC016629.1-201ENST00000596579 586 ntBASIC14.75□□□□□ -0.05
GABREP78334 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.75□□□□□ -0.05
GABREP78334 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 AL662844.4-201ENST00000606367 2838 ntBASIC14.75□□□□□ -0.05
GABREP78334 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 AC005052.1-201ENST00000625181 2492 ntBASIC14.75□□□□□ -0.05
GABREP78334 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
GABREP78334 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.75□□□□□ -0.05
GABREP78334 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.75□□□□□ -0.05
GABREP78334 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GABREP78334 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GABREP78334 DOC2GP-204ENST00000639052 2548 ntBASIC14.74□□□□□ -0.05
GABREP78334 AL138799.1-201ENST00000448213 1675 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms