Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.55□□□□□ -0.24
UBA52P62987 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.55□□□□□ -0.24
UBA52P62987 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.55□□□□□ -0.24
UBA52P62987 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.55□□□□□ -0.24
UBA52P62987 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.55□□□□□ -0.24
UBA52P62987 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.55□□□□□ -0.24
UBA52P62987 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.55□□□□□ -0.24
UBA52P62987 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.55□□□□□ -0.24
UBA52P62987 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 AC087641.1-201ENST00000557561 1021 ntBASIC13.55□□□□□ -0.24
UBA52P62987 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.55□□□□□ -0.24
UBA52P62987 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 AC015656.1-201ENST00000624209 3578 ntBASIC13.55□□□□□ -0.24
UBA52P62987 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.55□□□□□ -0.24
UBA52P62987 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.55□□□□□ -0.24
UBA52P62987 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBA52P62987 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBA52P62987 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
UBA52P62987 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.54□□□□□ -0.24
UBA52P62987 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 AC015922.1-201ENST00000421102 1152 ntBASIC13.54□□□□□ -0.24
UBA52P62987 AC005034.1-201ENST00000426657 489 ntBASIC13.54□□□□□ -0.24
UBA52P62987 GPS2P2-201ENST00000430745 888 ntBASIC13.54□□□□□ -0.24
UBA52P62987 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 SPCS2P4-201ENST00000436160 681 ntBASIC13.54□□□□□ -0.24
UBA52P62987 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.54□□□□□ -0.24
UBA52P62987 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.54□□□□□ -0.24
UBA52P62987 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.54□□□□□ -0.24
UBA52P62987 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBA52P62987 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.54□□□□□ -0.24
UBA52P62987 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBA52P62987 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBA52P62987 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBA52P62987 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.53□□□□□ -0.24
UBA52P62987 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms