Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RIPK4P57078 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.29■□□□□ 0.84
RIPK4P57078 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
RIPK4P57078 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.29■□□□□ 0.84
RIPK4P57078 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.29■□□□□ 0.84
RIPK4P57078 AP001582.1-201ENST00000525856 295 ntBASIC20.29■□□□□ 0.84
RIPK4P57078 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RIPK4P57078 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 AC008735.3-201ENST00000596646 500 ntBASIC20.29■□□□□ 0.84
RIPK4P57078 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RIPK4P57078 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 MSTO2P-201ENST00000314835 1709 ntBASIC20.29■□□□□ 0.84
RIPK4P57078 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RIPK4P57078 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK4P57078 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 C18orf15-201ENST00000623680 2534 ntBASIC20.28■□□□□ 0.84
RIPK4P57078 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 TMBIM7P-203ENST00000641617 1718 ntBASIC20.28■□□□□ 0.84
RIPK4P57078 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RIPK4P57078 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK4P57078 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.28■□□□□ 0.84
RIPK4P57078 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RIPK4P57078 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.28■□□□□ 0.84
RIPK4P57078 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK4P57078 U91328.1-201ENST00000437528 223 ntBASIC20.28■□□□□ 0.84
RIPK4P57078 AC093433.1-201ENST00000458048 571 ntBASIC20.28■□□□□ 0.84
RIPK4P57078 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.28■□□□□ 0.84
RIPK4P57078 MIR5189-201ENST00000577370 114 ntBASIC20.28■□□□□ 0.84
RIPK4P57078 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK4P57078 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.28■□□□□ 0.84
RIPK4P57078 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK4P57078 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK4P57078 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RIPK4P57078 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK4P57078 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RIPK4P57078 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.27■□□□□ 0.84
RIPK4P57078 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.27■□□□□ 0.84
RIPK4P57078 TDH-203ENST00000531764 1110 ntBASIC20.27■□□□□ 0.84
RIPK4P57078 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.27■□□□□ 0.84
RIPK4P57078 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK4P57078 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 AL645728.2-202ENST00000641679 227 ntBASIC20.27■□□□□ 0.84
RIPK4P57078 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
RIPK4P57078 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK4P57078 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RIPK4P57078 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIPK4P57078 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIPK4P57078 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.27■□□□□ 0.83
RIPK4P57078 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RIPK4P57078 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms