Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TCAF2P1-201ENST00000291129 2421 ntBASIC16.23■□□□□ 0.19
CDH6P55285 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH6P55285 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH6P55285 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH6P55285 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH6P55285 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH6P55285 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH6P55285 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.22■□□□□ 0.19
CDH6P55285 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH6P55285 AL590560.3-201ENST00000623350 461 ntBASIC16.22■□□□□ 0.19
CDH6P55285 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH6P55285 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.22■□□□□ 0.19
CDH6P55285 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CDH6P55285 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH6P55285 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH6P55285 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CDH6P55285 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDH6P55285 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDH6P55285 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH6P55285 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH6P55285 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH6P55285 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.21■□□□□ 0.19
CDH6P55285 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH6P55285 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH6P55285 AC015910.1-201ENST00000579400 975 ntBASIC16.21■□□□□ 0.19
CDH6P55285 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
CDH6P55285 AC106028.4-201ENST00000614509 607 ntBASIC16.21■□□□□ 0.19
CDH6P55285 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH6P55285 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH6P55285 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDH6P55285 AC023824.1-201ENST00000562945 2975 ntBASIC16.21■□□□□ 0.19
CDH6P55285 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH6P55285 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH6P55285 CICP11-201ENST00000434745 2827 ntBASIC16.21■□□□□ 0.19
CDH6P55285 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH6P55285 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH6P55285 AC011270.2-201ENST00000624293 2550 ntBASIC16.21■□□□□ 0.18
CDH6P55285 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CDH6P55285 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH6P55285 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH6P55285 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.21■□□□□ 0.18
CDH6P55285 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH6P55285 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH6P55285 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms