Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 METTL21AP1-201ENST00000438852 635 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.87□□□□□ -0.03
NR1H2P55055 CEND1P1-201ENST00000451006 455 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 AC074386.1-202ENST00000463561 864 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.87□□□□□ -0.03
NR1H2P55055 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 AL078644.1-201ENST00000609881 752 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NR1H2P55055 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 KRT18P28-201ENST00000453838 1332 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
NR1H2P55055 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.87□□□□□ -0.03
NR1H2P55055 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.87□□□□□ -0.03
NR1H2P55055 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NR1H2P55055 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NR1H2P55055 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 AL928921.2-201ENST00000641325 2442 ntBASIC14.86□□□□□ -0.03
NR1H2P55055 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 HSPA7-201ENST00000445535 1927 ntBASIC14.86□□□□□ -0.03
NR1H2P55055 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.86□□□□□ -0.03
NR1H2P55055 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
NR1H2P55055 OR7E47P-204ENST00000575924 449 ntBASIC14.86□□□□□ -0.03
NR1H2P55055 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 CICP17-201ENST00000418553 2377 ntBASIC14.86□□□□□ -0.03
NR1H2P55055 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 AC027601.5-201ENST00000624065 2482 ntBASIC14.86□□□□□ -0.03
NR1H2P55055 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
NR1H2P55055 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.86□□□□□ -0.03
NR1H2P55055 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NR1H2P55055 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR1H2P55055 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.85□□□□□ -0.03
NR1H2P55055 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 AC025580.3-201ENST00000617932 1424 ntBASIC14.85□□□□□ -0.03
NR1H2P55055 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms