Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.74□□□□□ -0.05
CLK1P49759 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 KRT8P48-201ENST00000515599 1220 ntBASIC14.74□□□□□ -0.05
CLK1P49759 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 AC092865.5-201ENST00000545435 363 ntBASIC14.74□□□□□ -0.05
CLK1P49759 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.74□□□□□ -0.05
CLK1P49759 MIR4469-201ENST00000583919 79 ntBASIC14.74□□□□□ -0.05
CLK1P49759 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 SPTSSB-204ENST00000617024 1292 ntBASIC14.74□□□□□ -0.05
CLK1P49759 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.74□□□□□ -0.05
CLK1P49759 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.74□□□□□ -0.05
CLK1P49759 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.74□□□□□ -0.05
CLK1P49759 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLK1P49759 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CLK1P49759 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.73□□□□□ -0.05
CLK1P49759 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.73□□□□□ -0.05
CLK1P49759 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLK1P49759 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CLK1P49759 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.73□□□□□ -0.05
CLK1P49759 SPCS2P4-201ENST00000436160 681 ntBASIC14.73□□□□□ -0.05
CLK1P49759 AL592309.1-201ENST00000443127 649 ntBASIC14.73□□□□□ -0.05
CLK1P49759 AC245100.5-201ENST00000452108 331 ntBASIC14.73□□□□□ -0.05
CLK1P49759 TIMM8BP1-201ENST00000452384 211 ntBASIC14.73□□□□□ -0.05
CLK1P49759 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.73□□□□□ -0.05
CLK1P49759 AP000344.2-201ENST00000512987 629 ntBASIC14.73□□□□□ -0.05
CLK1P49759 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.73□□□□□ -0.05
CLK1P49759 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.73□□□□□ -0.05
CLK1P49759 AL138918.1-201ENST00000568306 659 ntBASIC14.73□□□□□ -0.05
CLK1P49759 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.73□□□□□ -0.05
CLK1P49759 AC010327.4-202ENST00000591484 748 ntBASIC14.73□□□□□ -0.05
CLK1P49759 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 AC055717.3-201ENST00000622967 595 ntBASIC14.73□□□□□ -0.05
CLK1P49759 AL513210.1-201ENST00000629608 234 ntBASIC14.73□□□□□ -0.05
CLK1P49759 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.73□□□□□ -0.05
CLK1P49759 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.73□□□□□ -0.05
CLK1P49759 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLK1P49759 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms