Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
UBE2AP49459 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
UBE2AP49459 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC9.96□□□□□ -0.81
UBE2AP49459 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
UBE2AP49459 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
UBE2AP49459 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.96□□□□□ -0.81
UBE2AP49459 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
UBE2AP49459 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 CICP14-201ENST00000629111 2732 ntBASIC9.96□□□□□ -0.81
UBE2AP49459 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
UBE2AP49459 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
UBE2AP49459 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBE2AP49459 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.81
UBE2AP49459 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 ACTG1P14-201ENST00000446382 1122 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC9.96□□□□□ -0.82
UBE2AP49459 POLD2P1-201ENST00000511220 997 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 IGHV3OR16-6-201ENST00000568775 360 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 MTDHP5-201ENST00000598980 586 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 AC026979.3-201ENST00000607315 403 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
UBE2AP49459 TP73-211ENST00000604074 4806 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 AC144831.1-201ENST00000573312 2656 ntBASIC9.96□□□□□ -0.82
UBE2AP49459 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC9.96□□□□□ -0.82
UBE2AP49459 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBE2AP49459 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBE2AP49459 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 AC126177.1-201ENST00000547829 2218 ntBASIC9.95□□□□□ -0.82
UBE2AP49459 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2AP49459 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2AP49459 AL805961.2-201ENST00000642139 4817 ntBASIC9.95□□□□□ -0.82
UBE2AP49459 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC9.95□□□□□ -0.82
UBE2AP49459 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
UBE2AP49459 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2AP49459 HLA-H-201ENST00000383620 1096 ntBASIC9.95□□□□□ -0.82
UBE2AP49459 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2AP49459 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms