Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 RPS2P1-201ENST00000434010 821 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 KRT18P56-201ENST00000507275 550 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 PRYP6-201ENST00000514804 343 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-1P43699 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-1P43699 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.82□□□□□ -0.36
NKX2-1P43699 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX2-1P43699 CLEC4GP1-201ENST00000596555 870 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX2-1P43699 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 LINC01230-201ENST00000625222 3017 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX2-1P43699 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NKX2-1P43699 AC041040.2-201ENST00000622926 2899 ntBASIC12.82□□□□□ -0.36
NKX2-1P43699 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX2-1P43699 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX2-1P43699 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
NKX2-1P43699 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX2-1P43699 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.81□□□□□ -0.36
NKX2-1P43699 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms