Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA4P43681 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA4P43681 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.7■□□□□ 0.1
CHRNA4P43681 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRNA4P43681 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRNA4P43681 AL391069.4-201ENST00000609583 481 ntBASIC15.7■□□□□ 0.1
CHRNA4P43681 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRNA4P43681 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA4P43681 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.7■□□□□ 0.1
CHRNA4P43681 CLK3P2-201ENST00000427566 1453 ntBASIC15.7■□□□□ 0.1
CHRNA4P43681 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA4P43681 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA4P43681 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 TCAF2P1-201ENST00000291129 2421 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA4P43681 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA4P43681 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA4P43681 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 MEIS3P1-201ENST00000495167 958 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 RNA5SP421-201ENST00000516864 134 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA4P43681 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA4P43681 AC023310.3-201ENST00000557027 670 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 AC100756.1-201ENST00000562736 682 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 AC138749.3-201ENST00000567691 622 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 AC025181.2-201ENST00000606994 802 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 AC116165.1-201ENST00000611806 668 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA4P43681 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA4P43681 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHRNA4P43681 AC023824.1-201ENST00000562945 2975 ntBASIC15.69■□□□□ 0.1
CHRNA4P43681 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA4P43681 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA4P43681 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA4P43681 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms