Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.26■□□□□ 0.19
MTHFRP42898 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.26■□□□□ 0.19
MTHFRP42898 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 BX539320.1-201ENST00000623759 877 ntBASIC16.26■□□□□ 0.19
MTHFRP42898 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
MTHFRP42898 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFRP42898 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFRP42898 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFRP42898 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
MTHFRP42898 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.25■□□□□ 0.19
MTHFRP42898 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.25■□□□□ 0.19
MTHFRP42898 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.25■□□□□ 0.19
MTHFRP42898 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.25■□□□□ 0.19
MTHFRP42898 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 AL662844.4-201ENST00000606367 2838 ntBASIC16.25■□□□□ 0.19
MTHFRP42898 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFRP42898 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MTHFRP42898 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFRP42898 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 AL138799.1-201ENST00000448213 1675 ntBASIC16.24■□□□□ 0.19
MTHFRP42898 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFRP42898 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFRP42898 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.24■□□□□ 0.19
MTHFRP42898 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFRP42898 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFRP42898 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
MTHFRP42898 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.24■□□□□ 0.19
MTHFRP42898 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.24■□□□□ 0.19
MTHFRP42898 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.24■□□□□ 0.19
MTHFRP42898 UPF3AP2-201ENST00000457924 1132 ntBASIC16.24■□□□□ 0.19
MTHFRP42898 GAPDHP40-201ENST00000505218 1006 ntBASIC16.24■□□□□ 0.19
MTHFRP42898 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.24■□□□□ 0.19
MTHFRP42898 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.24■□□□□ 0.19
MTHFRP42898 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.24■□□□□ 0.19
MTHFRP42898 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFRP42898 CYP2T1P-202ENST00000641596 2535 ntBASIC16.24■□□□□ 0.19
MTHFRP42898 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms