Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 COX20P1-201ENST00000366529 357 ntBASIC17.01■□□□□ 0.31
HTTP42858 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.01■□□□□ 0.31
HTTP42858 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.01■□□□□ 0.31
HTTP42858 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 REXO1L2P-201ENST00000425429 2069 ntBASIC17■□□□□ 0.31
HTTP42858 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17■□□□□ 0.31
HTTP42858 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17■□□□□ 0.31
HTTP42858 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17■□□□□ 0.31
HTTP42858 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HTTP42858 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17■□□□□ 0.31
HTTP42858 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17■□□□□ 0.31
HTTP42858 NUDT4P2-201ENST00000578341 546 ntBASIC17■□□□□ 0.31
HTTP42858 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17■□□□□ 0.31
HTTP42858 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17■□□□□ 0.31
HTTP42858 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
HTTP42858 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HTTP42858 PCDHB19P-201ENST00000570871 2371 ntBASIC17■□□□□ 0.31
HTTP42858 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HTTP42858 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17■□□□□ 0.31
HTTP42858 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17■□□□□ 0.31
HTTP42858 MESTP3-201ENST00000503460 968 ntBASIC17■□□□□ 0.31
HTTP42858 FAM86KP-201ENST00000509817 987 ntBASIC17■□□□□ 0.31
HTTP42858 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17■□□□□ 0.31
HTTP42858 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 AL109837.1-201ENST00000603272 613 ntBASIC17■□□□□ 0.31
HTTP42858 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTTP42858 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.99■□□□□ 0.31
HTTP42858 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HTTP42858 PSMD4P1-201ENST00000433951 1109 ntBASIC16.99■□□□□ 0.31
HTTP42858 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 AC022616.1-201ENST00000518688 554 ntBASIC16.99■□□□□ 0.31
HTTP42858 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.99■□□□□ 0.31
HTTP42858 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.99■□□□□ 0.31
HTTP42858 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.99■□□□□ 0.31
HTTP42858 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HTTP42858 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 AL357373.1-201ENST00000394974 322 ntBASIC16.99■□□□□ 0.31
HTTP42858 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.99■□□□□ 0.31
HTTP42858 LINC00634-202ENST00000505157 222 ntBASIC16.99■□□□□ 0.31
HTTP42858 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.99■□□□□ 0.31
HTTP42858 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.99■□□□□ 0.31
HTTP42858 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTTP42858 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HTTP42858 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HTTP42858 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.98■□□□□ 0.31
HTTP42858 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.98■□□□□ 0.31
HTTP42858 AC107464.3-201ENST00000609172 737 ntBASIC16.98■□□□□ 0.31
HTTP42858 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HTTP42858 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.98■□□□□ 0.31
HTTP42858 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTTP42858 HLA-K-203ENST00000430151 1046 ntBASIC16.98■□□□□ 0.31
HTTP42858 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.98■□□□□ 0.31
HTTP42858 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms