Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.31□□□□□ -0.12
RFC3P40938 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFC3P40938 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 MIR658-201ENST00000385210 100 ntBASIC14.3□□□□□ -0.12
RFC3P40938 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.3□□□□□ -0.12
RFC3P40938 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.3□□□□□ -0.12
RFC3P40938 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 CROCCP4-201ENST00000457096 498 ntBASIC14.3□□□□□ -0.12
RFC3P40938 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.3□□□□□ -0.12
RFC3P40938 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.3□□□□□ -0.12
RFC3P40938 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.3□□□□□ -0.12
RFC3P40938 AC133539.2-201ENST00000604757 467 ntBASIC14.3□□□□□ -0.12
RFC3P40938 AL162274.1-201ENST00000617191 1098 ntBASIC14.3□□□□□ -0.12
RFC3P40938 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 AL513523.2-202ENST00000427283 2040 ntBASIC14.3□□□□□ -0.12
RFC3P40938 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
RFC3P40938 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFC3P40938 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFC3P40938 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 AC068587.6-202ENST00000641839 5619 ntBASIC14.29□□□□□ -0.12
RFC3P40938 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 MIR1909-201ENST00000411312 80 ntBASIC14.29□□□□□ -0.12
RFC3P40938 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 VDAC1P7-201ENST00000462417 847 ntBASIC14.29□□□□□ -0.12
RFC3P40938 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.29□□□□□ -0.12
RFC3P40938 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 AL049840.4-201ENST00000602422 811 ntBASIC14.29□□□□□ -0.12
RFC3P40938 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
RFC3P40938 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 KRT8P22-201ENST00000562317 1415 ntBASIC14.29□□□□□ -0.12
RFC3P40938 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
RFC3P40938 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RFC3P40938 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RFC3P40938 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms