Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 HYMAI-201ENST00000635591 3347 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.38■□□□□ 0.21
GRIK1P39086 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 SLC25A47P1-201ENST00000531577 414 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 PTP4A1P2-201ENST00000546033 454 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 AC106886.1-201ENST00000568660 600 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 MIR5189-201ENST00000577370 114 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 BTNL10-201ENST00000595971 695 ntBASIC16.38■□□□□ 0.21
GRIK1P39086 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.38■□□□□ 0.21
GRIK1P39086 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.38■□□□□ 0.21
GRIK1P39086 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GRIK1P39086 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.38■□□□□ 0.21
GRIK1P39086 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.37■□□□□ 0.21
GRIK1P39086 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.37■□□□□ 0.21
GRIK1P39086 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.37■□□□□ 0.21
GRIK1P39086 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.37■□□□□ 0.21
GRIK1P39086 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.37■□□□□ 0.21
GRIK1P39086 ARSEP1-201ENST00000420443 635 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 ATP5G2P4-201ENST00000442175 420 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.37■□□□□ 0.21
GRIK1P39086 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.37■□□□□ 0.21
GRIK1P39086 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GRIK1P39086 IGHV3-71-201ENST00000523324 359 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 AP001582.1-201ENST00000525856 295 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.37■□□□□ 0.21
GRIK1P39086 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.37■□□□□ 0.21
GRIK1P39086 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 CLUHP6-201ENST00000580789 941 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 AC008741.2-201ENST00000612792 3115 ntBASIC16.37■□□□□ 0.21
GRIK1P39086 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GRIK1P39086 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GRIK1P39086 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GRIK1P39086 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GRIK1P39086 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.36■□□□□ 0.21
GRIK1P39086 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GRIK1P39086 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
GRIK1P39086 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms