Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.47■□□□□ 0.07
HMGCLP35914 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGCLP35914 AC148477.4-201ENST00000613430 1793 ntBASIC15.47■□□□□ 0.07
HMGCLP35914 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGCLP35914 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
HMGCLP35914 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCLP35914 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCLP35914 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCLP35914 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCLP35914 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCLP35914 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGCLP35914 AC098850.1-201ENST00000419919 790 ntBASIC15.46■□□□□ 0.07
HMGCLP35914 MYCLP2-201ENST00000449268 967 ntBASIC15.46■□□□□ 0.07
HMGCLP35914 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGCLP35914 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGCLP35914 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.46■□□□□ 0.07
HMGCLP35914 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.46■□□□□ 0.07
HMGCLP35914 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGCLP35914 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 TP53TG3HP-202ENST00000569755 579 ntBASIC15.46■□□□□ 0.07
HMGCLP35914 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGCLP35914 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.46■□□□□ 0.07
HMGCLP35914 AC007431.3-201ENST00000623221 587 ntBASIC15.46■□□□□ 0.07
HMGCLP35914 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCLP35914 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCLP35914 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
HMGCLP35914 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
HMGCLP35914 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
HMGCLP35914 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGCLP35914 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.46■□□□□ 0.06
HMGCLP35914 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HMGCLP35914 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HMGCLP35914 AC023024.2-201ENST00000623561 1993 ntBASIC15.45■□□□□ 0.06
HMGCLP35914 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HMGCLP35914 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HMGCLP35914 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HMGCLP35914 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 INTS4P2-202ENST00000614726 2019 ntBASIC15.45■□□□□ 0.06
HMGCLP35914 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCLP35914 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGCLP35914 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 AC134915.1-201ENST00000426461 574 ntBASIC15.45■□□□□ 0.06
HMGCLP35914 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCLP35914 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCLP35914 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCLP35914 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.45■□□□□ 0.06
HMGCLP35914 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HMGCLP35914 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGCLP35914 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGCLP35914 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCLP35914 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCLP35914 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGCLP35914 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
HMGCLP35914 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGCLP35914 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.44■□□□□ 0.06
HMGCLP35914 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HMGCLP35914 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGCLP35914 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGCLP35914 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGCLP35914 VDAC1P7-201ENST00000462417 847 ntBASIC15.44■□□□□ 0.06
HMGCLP35914 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGCLP35914 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGCLP35914 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGCLP35914 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.44■□□□□ 0.06
HMGCLP35914 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms