Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA13P31271 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXA13P31271 AC092933.1-201ENST00000393644 945 ntBASIC17.65■□□□□ 0.42
HOXA13P31271 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA13P31271 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 AL355864.2-201ENST00000447420 863 ntBASIC17.65■□□□□ 0.42
HOXA13P31271 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA13P31271 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXA13P31271 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXA13P31271 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXA13P31271 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXA13P31271 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXA13P31271 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXA13P31271 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.64■□□□□ 0.42
HOXA13P31271 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HOXA13P31271 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
HOXA13P31271 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXA13P31271 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA13P31271 CTBP2P5-201ENST00000454986 1264 ntBASIC17.64■□□□□ 0.41
HOXA13P31271 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 AC022137.2-201ENST00000503482 481 ntBASIC17.64■□□□□ 0.41
HOXA13P31271 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXA13P31271 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXA13P31271 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 BX539320.1-201ENST00000623759 877 ntBASIC17.64■□□□□ 0.41
HOXA13P31271 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXA13P31271 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
HOXA13P31271 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.64■□□□□ 0.41
HOXA13P31271 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXA13P31271 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HOXA13P31271 ACKR1-201ENST00000368121 1240 ntBASIC17.63■□□□□ 0.41
HOXA13P31271 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA13P31271 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HOXA13P31271 FTH1P14-201ENST00000482930 551 ntBASIC17.63■□□□□ 0.41
HOXA13P31271 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA13P31271 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA13P31271 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.63■□□□□ 0.41
HOXA13P31271 AC244669.2-201ENST00000612320 853 ntBASIC17.63■□□□□ 0.41
HOXA13P31271 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HOXA13P31271 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HOXA13P31271 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.63■□□□□ 0.41
HOXA13P31271 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms