Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VAMP1P23763 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 KRT16P4-201ENST00000453883 522 ntBASIC13.24□□□□□ -0.29
VAMP1P23763 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.24□□□□□ -0.29
VAMP1P23763 AC138894.3-201ENST00000603787 634 ntBASIC13.24□□□□□ -0.29
VAMP1P23763 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
VAMP1P23763 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VAMP1P23763 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VAMP1P23763 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.23□□□□□ -0.29
VAMP1P23763 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 AC007614.4-201ENST00000564048 1827 ntBASIC13.23□□□□□ -0.29
VAMP1P23763 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.23□□□□□ -0.29
VAMP1P23763 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 RPS15P9-201ENST00000494093 319 ntBASIC13.23□□□□□ -0.29
VAMP1P23763 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 MTDHP3-201ENST00000594186 672 ntBASIC13.23□□□□□ -0.29
VAMP1P23763 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms