Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 AP000845.1-201ENST00000581677 2131 ntBASIC16.34■□□□□ 0.21
MMP8P22894 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP8P22894 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP8P22894 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP8P22894 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
MMP8P22894 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
MMP8P22894 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
MMP8P22894 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
MMP8P22894 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP8P22894 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP8P22894 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.33■□□□□ 0.2
MMP8P22894 GAPDHP40-201ENST00000505218 1006 ntBASIC16.33■□□□□ 0.2
MMP8P22894 RNA5SP421-201ENST00000516864 134 ntBASIC16.33■□□□□ 0.2
MMP8P22894 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.33■□□□□ 0.2
MMP8P22894 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.33■□□□□ 0.2
MMP8P22894 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 AC011467.4-201ENST00000594891 528 ntBASIC16.33■□□□□ 0.2
MMP8P22894 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
MMP8P22894 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP8P22894 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 AC023824.1-201ENST00000562945 2975 ntBASIC16.33■□□□□ 0.2
MMP8P22894 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP8P22894 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP8P22894 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MMP8P22894 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 AP002414.2-201ENST00000591780 3365 ntBASIC16.32■□□□□ 0.2
MMP8P22894 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
MMP8P22894 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP8P22894 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP8P22894 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP8P22894 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 DOC2GP-202ENST00000514950 1163 ntBASIC16.32■□□□□ 0.2
MMP8P22894 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP8P22894 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 AC023310.3-201ENST00000557027 670 ntBASIC16.32■□□□□ 0.2
MMP8P22894 AC100756.1-201ENST00000562736 682 ntBASIC16.32■□□□□ 0.2
MMP8P22894 AC138749.3-201ENST00000567691 622 ntBASIC16.32■□□□□ 0.2
MMP8P22894 AC027796.2-201ENST00000575326 344 ntBASIC16.32■□□□□ 0.2
MMP8P22894 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MMP8P22894 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP8P22894 AL513477.1-201ENST00000602865 2407 ntBASIC16.32■□□□□ 0.2
MMP8P22894 AC116165.1-201ENST00000611806 668 ntBASIC16.32■□□□□ 0.2
MMP8P22894 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.32■□□□□ 0.2
MMP8P22894 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP8P22894 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MMP8P22894 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms