Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.39□□□□□ -0.27
CCL1P22362 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 RN7SL618P-201ENST00000477850 296 ntBASIC13.39□□□□□ -0.27
CCL1P22362 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL1P22362 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.39□□□□□ -0.27
CCL1P22362 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CCL1P22362 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.39□□□□□ -0.27
CCL1P22362 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CCL1P22362 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.38□□□□□ -0.27
CCL1P22362 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL1P22362 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 AC051619.7-201ENST00000568314 623 ntBASIC13.38□□□□□ -0.27
CCL1P22362 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.38□□□□□ -0.27
CCL1P22362 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 AC000095.1-201ENST00000603208 874 ntBASIC13.38□□□□□ -0.27
CCL1P22362 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 AL138828.2-201ENST00000615812 383 ntBASIC13.38□□□□□ -0.27
CCL1P22362 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.38□□□□□ -0.27
CCL1P22362 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCL1P22362 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 AL009178.2-201ENST00000597278 2719 ntBASIC13.38□□□□□ -0.27
CCL1P22362 CICP14-201ENST00000629111 2732 ntBASIC13.38□□□□□ -0.27
CCL1P22362 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CCL1P22362 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 AC007191.1-201ENST00000623179 2995 ntBASIC13.38□□□□□ -0.27
CCL1P22362 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCL1P22362 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.37□□□□□ -0.27
CCL1P22362 AC023908.3-201ENST00000564211 3047 ntBASIC13.37□□□□□ -0.27
CCL1P22362 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL1P22362 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL1P22362 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL1P22362 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms