Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CD58P19256 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.73■□□□□ 0.27
CD58P19256 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.73■□□□□ 0.27
CD58P19256 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.73■□□□□ 0.27
CD58P19256 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.73■□□□□ 0.27
CD58P19256 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.73■□□□□ 0.27
CD58P19256 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.73■□□□□ 0.27
CD58P19256 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD58P19256 AC138969.3-201ENST00000546612 1459 ntBASIC16.73■□□□□ 0.27
CD58P19256 AC138932.2-201ENST00000548268 1459 ntBASIC16.73■□□□□ 0.27
CD58P19256 AC126755.4-201ENST00000549796 1459 ntBASIC16.73■□□□□ 0.27
CD58P19256 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD58P19256 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CD58P19256 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CD58P19256 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.72■□□□□ 0.27
CD58P19256 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.72■□□□□ 0.27
CD58P19256 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 FAM207CP-201ENST00000443486 507 ntBASIC16.72■□□□□ 0.27
CD58P19256 KRT18P43-201ENST00000469825 1281 ntBASIC16.72■□□□□ 0.27
CD58P19256 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CD58P19256 AC015910.1-201ENST00000579400 975 ntBASIC16.72■□□□□ 0.27
CD58P19256 AC092364.2-202ENST00000597012 1073 ntBASIC16.72■□□□□ 0.27
CD58P19256 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CD58P19256 AC007541.1-201ENST00000570282 1469 ntBASIC16.72■□□□□ 0.27
CD58P19256 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.72■□□□□ 0.27
CD58P19256 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD58P19256 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
CD58P19256 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CD58P19256 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CD58P19256 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.71■□□□□ 0.27
CD58P19256 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CD58P19256 AL132655.2-201ENST00000596276 594 ntBASIC16.71■□□□□ 0.27
CD58P19256 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CD58P19256 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms