Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A2P16615 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A2P16615 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A2P16615 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP2A2P16615 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.25■□□□□ 0.35
ATP2A2P16615 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.25■□□□□ 0.35
ATP2A2P16615 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A2P16615 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 AL118558.3-201ENST00000607414 1079 ntBASIC17.25■□□□□ 0.35
ATP2A2P16615 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.25■□□□□ 0.35
ATP2A2P16615 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP2A2P16615 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATP2A2P16615 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP2A2P16615 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 C1QBPP1-201ENST00000400117 770 ntBASIC17.24■□□□□ 0.35
ATP2A2P16615 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A2P16615 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A2P16615 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP2A2P16615 RN7SL190P-201ENST00000582519 257 ntBASIC17.24■□□□□ 0.35
ATP2A2P16615 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 RHOXF1P1-202ENST00000635473 501 ntBASIC17.24■□□□□ 0.35
ATP2A2P16615 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATP2A2P16615 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 PCGF3-213ENST00000620529 1899 ntBASIC17.24■□□□□ 0.35
ATP2A2P16615 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2A2P16615 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2A2P16615 MIR600HG-201ENST00000449175 5984 ntBASIC17.24■□□□□ 0.35
ATP2A2P16615 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC134312.5-201ENST00000568031 1313 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A2P16615 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2A2P16615 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC004987.2-201ENST00000395959 1148 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP2A2P16615 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 AZGP1P1-201ENST00000411909 902 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2A2P16615 AC012441.1-201ENST00000446669 685 ntBASIC17.23■□□□□ 0.35
ATP2A2P16615 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2A2P16615 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms