Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 PAUPAR-201ENST00000630360 2965 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 BCRP2-202ENST00000447763 634 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AC093433.1-201ENST00000458048 571 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 BCRP6-201ENST00000510112 632 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 BCRP7-201ENST00000511549 544 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PTP4A1P2-201ENST00000546033 454 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AL359881.2-201ENST00000602973 570 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 MSTO2P-201ENST00000314835 1709 ntBASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRGAP2CP0DJJ0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 AL596257.1-201ENST00000641463 2694 ntBASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.08■□□□□ 0.33
SRGAP2CP0DJJ0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AC022188.1-201ENST00000620960 1664 ntBASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AP001063.1-201ENST00000568332 529 ntBASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AC233724.13-201ENST00000598383 410 ntBASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 AC068587.6-202ENST00000641839 5619 ntBASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRGAP2CP0DJJ0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 AL138799.1-201ENST00000448213 1675 ntBASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SRGAP2CP0DJJ0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms