Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 AC127383.1-201ENST00000444697 1800 ntBASIC13.56□□□□□ -0.24
CSF1P09603 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CSF1P09603 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.56□□□□□ -0.24
CSF1P09603 AL645939.2-201ENST00000427340 991 ntBASIC13.56□□□□□ -0.24
CSF1P09603 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.56□□□□□ -0.24
CSF1P09603 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.56□□□□□ -0.24
CSF1P09603 MIR3909-201ENST00000579518 119 ntBASIC13.56□□□□□ -0.24
CSF1P09603 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 C20orf181-201ENST00000623918 480 ntBASIC13.56□□□□□ -0.24
CSF1P09603 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSF1P09603 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CSF1P09603 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 ELK2BP-201ENST00000415014 1224 ntBASIC13.55□□□□□ -0.24
CSF1P09603 FAM8A3P-201ENST00000427218 844 ntBASIC13.55□□□□□ -0.24
CSF1P09603 CNN2P11-201ENST00000429351 262 ntBASIC13.55□□□□□ -0.24
CSF1P09603 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.55□□□□□ -0.24
CSF1P09603 VN2R19P-201ENST00000442399 1052 ntBASIC13.55□□□□□ -0.24
CSF1P09603 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 ALG1L5P-201ENST00000482043 771 ntBASIC13.55□□□□□ -0.24
CSF1P09603 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.55□□□□□ -0.24
CSF1P09603 YBX1P5-201ENST00000509441 847 ntBASIC13.55□□□□□ -0.24
CSF1P09603 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 MIR4321-201ENST00000592276 80 ntBASIC13.55□□□□□ -0.24
CSF1P09603 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CSF1P09603 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.55□□□□□ -0.24
CSF1P09603 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSF1P09603 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.55□□□□□ -0.24
CSF1P09603 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 AC140479.7-201ENST00000636301 2332 ntBASIC13.55□□□□□ -0.24
CSF1P09603 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSF1P09603 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms