Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.37■□□□□ 0.37
CYP3A4P08684 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 GK-202ENST00000378941 458 ntTSL 3 BASIC17.37■□□□□ 0.37
CYP3A4P08684 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ARSEP1-201ENST00000420443 635 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 HLA-K-203ENST00000430151 1046 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 KRT43P-201ENST00000434019 910 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.37■□□□□ 0.37
CYP3A4P08684 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.37■□□□□ 0.37
CYP3A4P08684 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 AL360270.3-201ENST00000609118 1348 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.37■□□□□ 0.37
CYP3A4P08684 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 REXO1L4P-201ENST00000605109 1937 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.37■□□□□ 0.37
CYP3A4P08684 AC012508.2-201ENST00000567613 1472 ntBASIC17.37■□□□□ 0.37
CYP3A4P08684 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.37■□□□□ 0.37
CYP3A4P08684 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CYP3A4P08684 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 MROH4P-201ENST00000431302 1578 ntBASIC17.36■□□□□ 0.37
CYP3A4P08684 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CYP3A4P08684 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CYP3A4P08684 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.36■□□□□ 0.37
CYP3A4P08684 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CYP3A4P08684 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.36■□□□□ 0.37
CYP3A4P08684 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CYP3A4P08684 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CYP3A4P08684 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CYP3A4P08684 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CYP3A4P08684 AL138709.1-201ENST00000614840 1693 ntBASIC17.36■□□□□ 0.37
CYP3A4P08684 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.35■□□□□ 0.37
CYP3A4P08684 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 BOLA2P3-201ENST00000404566 256 ntBASIC17.35■□□□□ 0.37
CYP3A4P08684 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.35■□□□□ 0.37
CYP3A4P08684 CROCCP4-201ENST00000457096 498 ntBASIC17.35■□□□□ 0.37
CYP3A4P08684 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.35■□□□□ 0.37
CYP3A4P08684 HILS1-202ENST00000545329 423 ntBASIC17.35■□□□□ 0.37
CYP3A4P08684 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.35■□□□□ 0.37
CYP3A4P08684 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 AC145423.3-201ENST00000615987 467 ntBASIC17.35■□□□□ 0.37
CYP3A4P08684 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYP3A4P08684 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CYP3A4P08684 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms