Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.61■□□□□ 0.57
CHGBP05060 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHGBP05060 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CHGBP05060 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHGBP05060 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 CROCCP4-201ENST00000457096 498 ntBASIC18.6■□□□□ 0.57
CHGBP05060 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 USP32P1-208ENST00000506594 1164 ntBASIC18.6■□□□□ 0.57
CHGBP05060 AP001582.1-201ENST00000525856 295 ntBASIC18.6■□□□□ 0.57
CHGBP05060 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.6■□□□□ 0.57
CHGBP05060 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.6■□□□□ 0.57
CHGBP05060 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHGBP05060 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHGBP05060 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
CHGBP05060 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.59■□□□□ 0.57
CHGBP05060 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 AC079776.1-201ENST00000401540 1152 ntBASIC18.59■□□□□ 0.57
CHGBP05060 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 TTTY23B-201ENST00000442790 549 ntBASIC18.59■□□□□ 0.57
CHGBP05060 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 AC093433.1-201ENST00000458048 571 ntBASIC18.59■□□□□ 0.57
CHGBP05060 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.59■□□□□ 0.57
CHGBP05060 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.59■□□□□ 0.57
CHGBP05060 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.59■□□□□ 0.57
CHGBP05060 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.59■□□□□ 0.57
CHGBP05060 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
CHGBP05060 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.59■□□□□ 0.57
CHGBP05060 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CHGBP05060 AP000845.1-201ENST00000581677 2131 ntBASIC18.59■□□□□ 0.57
CHGBP05060 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.59■□□□□ 0.57
CHGBP05060 REXO1L2P-201ENST00000425429 2069 ntBASIC18.59■□□□□ 0.57
CHGBP05060 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHGBP05060 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHGBP05060 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.58■□□□□ 0.57
CHGBP05060 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 AC148477.4-201ENST00000613430 1793 ntBASIC18.58■□□□□ 0.57
CHGBP05060 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHGBP05060 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.58■□□□□ 0.57
CHGBP05060 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.58■□□□□ 0.57
CHGBP05060 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms