Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6AP02538 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 MIR4453-201ENST00000584019 89 ntBASIC15.15■□□□□ 0.02
KRT6AP02538 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6AP02538 AP001059.3-201ENST00000619053 235 ntBASIC15.15■□□□□ 0.02
KRT6AP02538 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6AP02538 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6AP02538 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6AP02538 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 AC104581.4-201ENST00000623126 3052 ntBASIC15.14■□□□□ 0.01
KRT6AP02538 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 AL079307.3-201ENST00000556114 283 ntBASIC15.14■□□□□ 0.01
KRT6AP02538 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
KRT6AP02538 MIR6069-201ENST00000620069 79 ntBASIC15.14■□□□□ 0.01
KRT6AP02538 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 AC023024.2-201ENST00000623561 1993 ntBASIC15.14■□□□□ 0.01
KRT6AP02538 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
KRT6AP02538 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
KRT6AP02538 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6AP02538 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRT6AP02538 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT6AP02538 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
KRT6AP02538 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT6AP02538 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT6AP02538 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT6AP02538 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT6AP02538 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT6AP02538 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms