Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.47■□□□□ 0.07
S1PR4O95977 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.47■□□□□ 0.07
S1PR4O95977 AC010740.1-201ENST00000417035 684 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 HMGB3P14-201ENST00000494195 599 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.47■□□□□ 0.07
S1PR4O95977 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.47■□□□□ 0.07
S1PR4O95977 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 AL121723.1-201ENST00000445194 1519 ntBASIC15.47■□□□□ 0.07
S1PR4O95977 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR4O95977 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR4O95977 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
S1PR4O95977 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 AC138969.3-201ENST00000546612 1459 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 AC138932.2-201ENST00000548268 1459 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 AC126755.4-201ENST00000549796 1459 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 AL512638.1-201ENST00000457493 794 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 AC011467.4-201ENST00000594891 528 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 ZBED1P1-201ENST00000502364 1930 ntBASIC15.46■□□□□ 0.07
S1PR4O95977 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
S1PR4O95977 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.46■□□□□ 0.07
S1PR4O95977 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
S1PR4O95977 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
S1PR4O95977 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR4O95977 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.06
S1PR4O95977 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR4O95977 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR4O95977 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
S1PR4O95977 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.46■□□□□ 0.06
S1PR4O95977 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
S1PR4O95977 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.46■□□□□ 0.06
S1PR4O95977 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.45■□□□□ 0.06
S1PR4O95977 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
S1PR4O95977 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.45■□□□□ 0.06
S1PR4O95977 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
S1PR4O95977 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms