Protein–RNA interactions for Protein: O75678

RFPL2, Ret finger protein-like 2, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2O75678 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.21■□□□□ 0.19
RFPL2O75678 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 RHOQP1-201ENST00000555758 579 ntBASIC16.21■□□□□ 0.19
RFPL2O75678 ACTG1P17-201ENST00000558391 1119 ntBASIC16.21■□□□□ 0.19
RFPL2O75678 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.21■□□□□ 0.19
RFPL2O75678 EEF1DP1-201ENST00000585891 896 ntBASIC16.21■□□□□ 0.19
RFPL2O75678 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RFPL2O75678 AL096828.3-201ENST00000615354 462 ntBASIC16.21■□□□□ 0.19
RFPL2O75678 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.21■□□□□ 0.19
RFPL2O75678 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.21■□□□□ 0.19
RFPL2O75678 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.21■□□□□ 0.19
RFPL2O75678 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.21■□□□□ 0.19
RFPL2O75678 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFPL2O75678 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
RFPL2O75678 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFPL2O75678 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RFPL2O75678 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.21■□□□□ 0.18
RFPL2O75678 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFPL2O75678 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFPL2O75678 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RFPL2O75678 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFPL2O75678 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFPL2O75678 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 AL354989.2-201ENST00000435838 1540 ntBASIC16.2■□□□□ 0.18
RFPL2O75678 AC015818.8-201ENST00000587907 1519 ntBASIC16.2■□□□□ 0.18
RFPL2O75678 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFPL2O75678 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RFPL2O75678 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
RFPL2O75678 SLC25A24P2-201ENST00000415059 510 ntBASIC16.2■□□□□ 0.18
RFPL2O75678 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.2■□□□□ 0.18
RFPL2O75678 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.2■□□□□ 0.18
RFPL2O75678 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RFPL2O75678 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.2■□□□□ 0.18
RFPL2O75678 AP006547.1-201ENST00000563435 692 ntBASIC16.2■□□□□ 0.18
RFPL2O75678 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFPL2O75678 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFPL2O75678 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.19■□□□□ 0.18
RFPL2O75678 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL2O75678 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL2O75678 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
RFPL2O75678 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL2O75678 LINC00554-201ENST00000564841 3011 ntBASIC16.19■□□□□ 0.18
RFPL2O75678 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFPL2O75678 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL2O75678 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.19■□□□□ 0.18
RFPL2O75678 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFPL2O75678 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms