Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN11O75508 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN11O75508 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN11O75508 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CLDN11O75508 MIR5189-201ENST00000577370 114 ntBASIC15.84■□□□□ 0.13
CLDN11O75508 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN11O75508 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN11O75508 BX539320.1-201ENST00000623759 877 ntBASIC15.84■□□□□ 0.13
CLDN11O75508 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN11O75508 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN11O75508 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLDN11O75508 AC068587.6-202ENST00000641839 5619 ntBASIC15.83■□□□□ 0.13
CLDN11O75508 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN11O75508 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN11O75508 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN11O75508 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN11O75508 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLDN11O75508 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 NUS1P3-201ENST00000423502 862 ntBASIC15.83■□□□□ 0.12
CLDN11O75508 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN11O75508 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN11O75508 AP001582.1-201ENST00000525856 295 ntBASIC15.83■□□□□ 0.12
CLDN11O75508 TDH-203ENST00000531764 1110 ntBASIC15.83■□□□□ 0.12
CLDN11O75508 PTP4A1P2-201ENST00000546033 454 ntBASIC15.83■□□□□ 0.12
CLDN11O75508 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN11O75508 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CLDN11O75508 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN11O75508 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN11O75508 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CLDN11O75508 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLDN11O75508 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLDN11O75508 SSR4P1-203ENST00000599569 2260 ntBASIC15.83■□□□□ 0.12
CLDN11O75508 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN11O75508 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN11O75508 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN11O75508 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.82■□□□□ 0.12
CLDN11O75508 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 AL645937.2-201ENST00000396808 931 ntBASIC15.82■□□□□ 0.12
CLDN11O75508 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN11O75508 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN11O75508 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN11O75508 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms