Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
NDUFS3O75489 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NDUFS3O75489 AC100757.3-201ENST00000622361 1406 ntBASIC15.57■□□□□ 0.08
NDUFS3O75489 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.57■□□□□ 0.08
NDUFS3O75489 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFS3O75489 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NDUFS3O75489 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFS3O75489 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFS3O75489 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NDUFS3O75489 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFS3O75489 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NDUFS3O75489 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFS3O75489 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 RPL5P21-201ENST00000404620 815 ntBASIC15.56■□□□□ 0.08
NDUFS3O75489 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AC241585.1-201ENST00000433527 519 ntBASIC15.56■□□□□ 0.08
NDUFS3O75489 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.56■□□□□ 0.08
NDUFS3O75489 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AL590560.3-201ENST00000623350 461 ntBASIC15.56■□□□□ 0.08
NDUFS3O75489 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
NDUFS3O75489 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
NDUFS3O75489 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFS3O75489 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AC148477.4-201ENST00000613430 1793 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AC084364.1-201ENST00000551967 1556 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 OR2I1P-210ENST00000642037 4691 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 AC126365.1-201ENST00000578585 1514 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 KRT8P44-201ENST00000441609 1350 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AC015922.1-201ENST00000421102 1152 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 KRT18P64-201ENST00000434946 1219 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.55■□□□□ 0.08
NDUFS3O75489 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.55■□□□□ 0.08
NDUFS3O75489 LINC01115-203ENST00000606068 577 ntBASIC15.55■□□□□ 0.08
NDUFS3O75489 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.55■□□□□ 0.08
NDUFS3O75489 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NDUFS3O75489 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFS3O75489 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NDUFS3O75489 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms