Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC244452.3-201ENST00000636814 210 ntBASIC18.08■□□□□ 0.48
CTNND1O60716 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNND1O60716 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNND1O60716 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
CTNND1O60716 FER1L4-210ENST00000615531 5998 ntBASIC18.08■□□□□ 0.48
CTNND1O60716 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNND1O60716 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CTNND1O60716 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNND1O60716 AL391005.1-201ENST00000623953 2435 ntBASIC18.08■□□□□ 0.48
CTNND1O60716 AL354989.2-201ENST00000435838 1540 ntBASIC18.08■□□□□ 0.48
CTNND1O60716 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTNND1O60716 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CTNND1O60716 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTNND1O60716 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 AL139094.1-201ENST00000405549 1188 ntBASIC18.07■□□□□ 0.48
CTNND1O60716 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.07■□□□□ 0.48
CTNND1O60716 CNN2P10-201ENST00000443067 918 ntBASIC18.07■□□□□ 0.48
CTNND1O60716 AC004066.1-201ENST00000502488 802 ntBASIC18.07■□□□□ 0.48
CTNND1O60716 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.07■□□□□ 0.48
CTNND1O60716 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.07■□□□□ 0.48
CTNND1O60716 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.07■□□□□ 0.48
CTNND1O60716 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.07■□□□□ 0.48
CTNND1O60716 AC007787.1-201ENST00000588095 1583 ntBASIC18.07■□□□□ 0.48
CTNND1O60716 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTNND1O60716 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.07■□□□□ 0.48
CTNND1O60716 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTNND1O60716 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CTNND1O60716 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNND1O60716 AC022188.1-201ENST00000620960 1664 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.06■□□□□ 0.48
CTNND1O60716 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNND1O60716 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTNND1O60716 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNND1O60716 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.06■□□□□ 0.48
CTNND1O60716 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.06■□□□□ 0.48
CTNND1O60716 AKR7A2P1-201ENST00000460134 915 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNND1O60716 LINC02447-202ENST00000501888 2146 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNND1O60716 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 ENPP7P14-201ENST00000621765 1040 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 LRRC59-203ENST00000576448 1531 ntBASIC18.06■□□□□ 0.48
CTNND1O60716 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CTNND1O60716 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNND1O60716 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTNND1O60716 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.05■□□□□ 0.48
CTNND1O60716 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTNND1O60716 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTNND1O60716 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CTNND1O60716 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNND1O60716 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms