Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 GPR182-203ENST00000622922 591 ntBASIC15.47■□□□□ 0.07
PCDHGA12O60330 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA12O60330 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGA12O60330 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AL596087.1-201ENST00000400979 1969 ntBASIC15.46■□□□□ 0.07
PCDHGA12O60330 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC007551.1-201ENST00000457394 519 ntBASIC15.46■□□□□ 0.07
PCDHGA12O60330 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC120045.2-201ENST00000567334 178 ntBASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AC103810.3-201ENST00000583567 96 ntBASIC15.46■□□□□ 0.07
PCDHGA12O60330 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA12O60330 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA12O60330 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.46■□□□□ 0.07
PCDHGA12O60330 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGA12O60330 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGA12O60330 AL603832.2-201ENST00000566195 2125 ntBASIC15.46■□□□□ 0.06
PCDHGA12O60330 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGA12O60330 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 AC010491.1-201ENST00000563101 2797 ntBASIC15.45■□□□□ 0.06
PCDHGA12O60330 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.45■□□□□ 0.06
PCDHGA12O60330 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 C1QBPP1-201ENST00000400117 770 ntBASIC15.45■□□□□ 0.06
PCDHGA12O60330 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 BAATP1-201ENST00000412284 1225 ntBASIC15.45■□□□□ 0.06
PCDHGA12O60330 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 PFN1P12-201ENST00000455938 534 ntBASIC15.45■□□□□ 0.06
PCDHGA12O60330 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA12O60330 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHGA12O60330 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms