Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNA5SP486-201ENST00000515961 83 ntBASIC17.74■□□□□ 0.43
ATP2A1O14983 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A1O14983 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.74■□□□□ 0.43
ATP2A1O14983 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A1O14983 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.74■□□□□ 0.43
ATP2A1O14983 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
ATP2A1O14983 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ATP2A1O14983 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 RNU1-114P-201ENST00000365297 166 ntBASIC17.73■□□□□ 0.43
ATP2A1O14983 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATP2A1O14983 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 RPL13AP20-201ENST00000459725 609 ntBASIC17.73■□□□□ 0.43
ATP2A1O14983 AC108725.1-201ENST00000495472 409 ntBASIC17.73■□□□□ 0.43
ATP2A1O14983 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.73■□□□□ 0.43
ATP2A1O14983 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.73■□□□□ 0.43
ATP2A1O14983 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 MIR6787-201ENST00000616675 61 ntBASIC17.73■□□□□ 0.43
ATP2A1O14983 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 AC020907.1-201ENST00000616460 1350 ntBASIC17.73■□□□□ 0.43
ATP2A1O14983 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP2A1O14983 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP2A1O14983 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP2A1O14983 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC022188.1-201ENST00000620960 1664 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP2A1O14983 PFN1P12-201ENST00000455938 534 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 RN7SL560P-201ENST00000577943 264 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 RN7SL48P-201ENST00000579283 293 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC009542.2-202ENST00000619004 1067 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 AC138951.2-201ENST00000623455 1161 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 AC006453.4-201ENST00000636949 1252 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP2A1O14983 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms