Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.29■□□□□ 0.2
SOX1O00570 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 AQP7P3-201ENST00000624547 1041 ntBASIC16.29■□□□□ 0.2
SOX1O00570 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SOX1O00570 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
SOX1O00570 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SOX1O00570 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.29■□□□□ 0.2
SOX1O00570 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SOX1O00570 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
SOX1O00570 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 AC068880.1-201ENST00000507289 2297 ntBASIC16.28■□□□□ 0.2
SOX1O00570 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 GCSHP3-201ENST00000431120 391 ntBASIC16.28■□□□□ 0.2
SOX1O00570 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.28■□□□□ 0.2
SOX1O00570 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 AC055811.3-201ENST00000584952 686 ntBASIC16.28■□□□□ 0.2
SOX1O00570 AC008805.1-201ENST00000590892 364 ntBASIC16.28■□□□□ 0.2
SOX1O00570 PEBP1P2-201ENST00000603980 558 ntBASIC16.28■□□□□ 0.2
SOX1O00570 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.28■□□□□ 0.2
SOX1O00570 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SOX1O00570 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SOX1O00570 KRT8P14-201ENST00000414254 1442 ntBASIC16.28■□□□□ 0.2
SOX1O00570 E2F3P2-201ENST00000447755 1422 ntBASIC16.28■□□□□ 0.2
SOX1O00570 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.27■□□□□ 0.2
SOX1O00570 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.27■□□□□ 0.2
SOX1O00570 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.2
SOX1O00570 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SOX1O00570 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SOX1O00570 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.27■□□□□ 0.2
SOX1O00570 AC244197.1-201ENST00000456494 951 ntBASIC16.27■□□□□ 0.2
SOX1O00570 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.27■□□□□ 0.2
SOX1O00570 AC012073.1-201ENST00000606114 1108 ntBASIC16.27■□□□□ 0.2
SOX1O00570 AC005041.3-201ENST00000606287 649 ntBASIC16.27■□□□□ 0.2
SOX1O00570 AC010503.4-201ENST00000615487 688 ntBASIC16.27■□□□□ 0.2
SOX1O00570 AC138466.3-201ENST00000619983 221 ntBASIC16.27■□□□□ 0.2
SOX1O00570 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX1O00570 CROCCP2-202ENST00000412962 2773 ntBASIC16.27■□□□□ 0.2
SOX1O00570 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SOX1O00570 KRT8P21-201ENST00000430398 1491 ntBASIC16.27■□□□□ 0.19
SOX1O00570 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SOX1O00570 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX1O00570 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX1O00570 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.27■□□□□ 0.19
SOX1O00570 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX1O00570 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms