Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 AC140878.1-201ENST00000565277 250 ntBASIC15.31■□□□□ 0.04
CDC7O00311 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.31■□□□□ 0.04
CDC7O00311 AC015911.4-201ENST00000588022 1070 ntBASIC15.31■□□□□ 0.04
CDC7O00311 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CDC7O00311 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
CDC7O00311 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDC7O00311 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC7O00311 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 RPL5P21-201ENST00000404620 815 ntBASIC15.3■□□□□ 0.04
CDC7O00311 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 TREML5P-201ENST00000421694 576 ntBASIC15.3■□□□□ 0.04
CDC7O00311 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC7O00311 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC7O00311 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC7O00311 AC015910.1-201ENST00000579400 975 ntBASIC15.3■□□□□ 0.04
CDC7O00311 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC7O00311 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC7O00311 GPALPP1-207ENST00000611650 899 ntBASIC15.3■□□□□ 0.04
CDC7O00311 AC139530.3-201ENST00000620344 690 ntBASIC15.3■□□□□ 0.04
CDC7O00311 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC7O00311 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CDC7O00311 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDC7O00311 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC7O00311 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 AC015922.1-201ENST00000421102 1152 ntBASIC15.29■□□□□ 0.04
CDC7O00311 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 AC097493.3-201ENST00000509725 367 ntBASIC15.29■□□□□ 0.04
CDC7O00311 AC044860.1-202ENST00000559481 777 ntBASIC15.29■□□□□ 0.04
CDC7O00311 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.29■□□□□ 0.04
CDC7O00311 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 AC074044.1-201ENST00000609673 707 ntBASIC15.29■□□□□ 0.04
CDC7O00311 AC006538.3-201ENST00000612495 578 ntBASIC15.29■□□□□ 0.04
CDC7O00311 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDC7O00311 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC7O00311 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDC7O00311 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDC7O00311 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms