Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 AC007292.2-201ENST00000593524 1812 ntBASIC12.7□□□□□ -0.38
LINC00473A8K010 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00473A8K010 RPSAP43-201ENST00000402237 625 ntBASIC12.7□□□□□ -0.38
LINC00473A8K010 AC074338.1-201ENST00000416825 156 ntBASIC12.7□□□□□ -0.38
LINC00473A8K010 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00473A8K010 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 MIR3687-2-201ENST00000577708 61 ntBASIC12.7□□□□□ -0.38
LINC00473A8K010 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00473A8K010 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 MIR3687-1-201ENST00000614492 61 ntBASIC12.7□□□□□ -0.38
LINC00473A8K010 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00473A8K010 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00473A8K010 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00473A8K010 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00473A8K010 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC00473A8K010 WASH3P-207ENST00000560956 1394 ntBASIC12.69□□□□□ -0.38
LINC00473A8K010 FO538757.1-201ENST00000623083 1397 ntBASIC12.69□□□□□ -0.38
LINC00473A8K010 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 AL390755.1-201ENST00000623716 2027 ntBASIC12.69□□□□□ -0.38
LINC00473A8K010 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00473A8K010 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
LINC00473A8K010 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.69□□□□□ -0.38
LINC00473A8K010 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00473A8K010 AL589739.1-201ENST00000607720 493 ntBASIC12.69□□□□□ -0.38
LINC00473A8K010 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00473A8K010 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
LINC00473A8K010 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00473A8K010 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00473A8K010 SNX18-202ENST00000343017 3140 ntBASIC12.68□□□□□ -0.38
LINC00473A8K010 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00473A8K010 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00473A8K010 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms