Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.22■□□□□ 0.19
SRRM3A6NNA2 AC131009.4-201ENST00000624048 1740 ntBASIC16.22■□□□□ 0.19
SRRM3A6NNA2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
SRRM3A6NNA2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 SLC22A20-204ENST00000530038 1673 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 SPDYE14P-201ENST00000442619 822 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 FAM8A2P-201ENST00000528813 1142 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 AC138969.3-201ENST00000546612 1459 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 AC138932.2-201ENST00000548268 1459 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 AC126755.4-201ENST00000549796 1459 ntBASIC16.21■□□□□ 0.19
SRRM3A6NNA2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM3A6NNA2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRRM3A6NNA2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRRM3A6NNA2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRRM3A6NNA2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 AL590787.1-201ENST00000568856 1315 ntBASIC16.2■□□□□ 0.18
SRRM3A6NNA2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 AC136759.1-202ENST00000530858 2194 ntBASIC16.2■□□□□ 0.18
SRRM3A6NNA2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 TP53TG3HP-202ENST00000569755 579 ntBASIC16.2■□□□□ 0.18
SRRM3A6NNA2 AL162274.1-201ENST00000617191 1098 ntBASIC16.2■□□□□ 0.18
SRRM3A6NNA2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM3A6NNA2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM3A6NNA2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms