Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AL138918.1-201ENST00000568306 659 ntBASIC13.36□□□□□ -0.27
TMEM235A6NFC5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AC073389.1-201ENST00000595595 795 ntBASIC13.36□□□□□ -0.27
TMEM235A6NFC5 MIR7706-201ENST00000613747 67 ntBASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 AC025580.3-201ENST00000617932 1424 ntBASIC13.36□□□□□ -0.27
TMEM235A6NFC5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 BCAR1-209ENST00000546196 1340 ntBASIC13.36□□□□□ -0.27
TMEM235A6NFC5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM235A6NFC5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 FOXO1B-201ENST00000504678 1527 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 FAM8A3P-201ENST00000427218 844 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 PHKG1P2-201ENST00000457537 863 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 EMBP1-201ENST00000458200 901 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 KRT8P37-201ENST00000451609 1420 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms