Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 INTS4P1-203ENST00000641008 3683 ntBASIC16.57■□□□□ 0.24
RCCD1A6NED2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.57■□□□□ 0.24
RCCD1A6NED2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCCD1A6NED2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 NORAD-201ENST00000565493 5339 ntBASIC16.56■□□□□ 0.24
RCCD1A6NED2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 KRT18P64-201ENST00000434946 1219 ntBASIC16.56■□□□□ 0.24
RCCD1A6NED2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 AC011467.4-201ENST00000594891 528 ntBASIC16.56■□□□□ 0.24
RCCD1A6NED2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RCCD1A6NED2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCCD1A6NED2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 FO393414.2-201ENST00000405153 598 ntBASIC16.55■□□□□ 0.24
RCCD1A6NED2 ALG1L5P-201ENST00000482043 771 ntBASIC16.55■□□□□ 0.24
RCCD1A6NED2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RCCD1A6NED2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
RCCD1A6NED2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms