Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 GHSR-202ENST00000427970 912 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 AL353637.1-201ENST00000451571 732 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 AC104073.2-201ENST00000453737 312 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 AC019193.1-201ENST00000506678 823 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 MIR4750-201ENST00000584564 56 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 PRORSD1P-202ENST00000563365 2154 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 AP000593.2-201ENST00000542775 1433 ntBASIC20.73■□□□□ 0.91
SBNO1A3KN83 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 AL355334.1-201ENST00000417713 215 ntBASIC20.72■□□□□ 0.91
SBNO1A3KN83 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 AC004466.1-201ENST00000599515 1080 ntBASIC20.72■□□□□ 0.91
SBNO1A3KN83 AC073352.2-201ENST00000609385 439 ntBASIC20.72■□□□□ 0.91
SBNO1A3KN83 CYP2T1P-202ENST00000641596 2535 ntBASIC20.72■□□□□ 0.91
SBNO1A3KN83 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SBNO1A3KN83 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 AC006453.1-201ENST00000636037 1257 ntBASIC20.72■□□□□ 0.91
SBNO1A3KN83 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.72■□□□□ 0.91
SBNO1A3KN83 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 AC024909.3-201ENST00000611513 2257 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 ISCA2P1-201ENST00000425548 448 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 PUDPP3-201ENST00000445368 636 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 AL160314.3-201ENST00000556041 767 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 NPM1P43-201ENST00000558669 786 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 AL358472.3-201ENST00000608147 415 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 AC090164.2-201ENST00000611487 516 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 AC011491.1-203ENST00000637688 543 ntBASIC20.71■□□□□ 0.91
SBNO1A3KN83 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SBNO1A3KN83 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.71■□□□□ 0.91
SBNO1A3KN83 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
SBNO1A3KN83 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 AC084364.1-201ENST00000551967 1556 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms