Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 TCAF2P1-201ENST00000291129 2421 ntBASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 AL645937.2-201ENST00000396808 931 ntBASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 C1QBPP1-201ENST00000400117 770 ntBASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRBV5-4A0A0C4DH59 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 WFDC1-204ENST00000613603 549 ntBASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PRSS30P-206ENST00000641773 873 ntBASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV5-4A0A0C4DH59 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV5-4A0A0C4DH59 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms