Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AL450472.2-201ENST00000603663 1156 ntBASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 WASH3P-207ENST00000560956 1394 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 FO538757.1-201ENST00000623083 1397 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 HNRNPDP1-201ENST00000439535 754 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 AC108751.1-201ENST00000490852 363 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 PRELID1P1-202ENST00000567272 903 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 AC117500.6-201ENST00000624871 588 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 AC041040.2-201ENST00000622926 2899 ntBASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV18A0A075B6X5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.46□□□□□ -0.26
TRAV18A0A075B6X5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV18A0A075B6X5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms