Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC2Q9Y5Z7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 HIST2H2BB-201ENST00000449108 381 ntBASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 AL391280.1-201ENST00000506969 1062 ntBASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 AC069224.1-201ENST00000566372 1715 ntBASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC2Q9Y5Z7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 RN7SL11P-201ENST00000471305 293 ntBASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 TUBBP5-203ENST00000508529 1334 ntBASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCFC2Q9Y5Z7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCFC2Q9Y5Z7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AL354877.1-201ENST00000424412 413 ntBASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 CHMP1AP1-201ENST00000445563 662 ntBASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 TMEM198B-204ENST00000484016 896 ntBASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AC100850.1-201ENST00000506768 649 ntBASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC2Q9Y5Z7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms