Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
R3HCC1Q9Y3T6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
R3HCC1Q9Y3T6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MIR4469-201ENST00000583919 79 ntBASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 COL6A4P2-202ENST00000504443 2753 ntBASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.97■□□□□ 0.47
R3HCC1Q9Y3T6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 AC092474.2-201ENST00000424288 719 ntBASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 ALG1L5P-201ENST00000482043 771 ntBASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 KRT18P34-201ENST00000488218 1270 ntBASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
R3HCC1Q9Y3T6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
R3HCC1Q9Y3T6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.96■□□□□ 0.46
R3HCC1Q9Y3T6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 SPDYE11-202ENST00000450699 704 ntBASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.95■□□□□ 0.46
R3HCC1Q9Y3T6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms