Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL596442.2-201ENST00000610240 980 ntBASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AC005840.4-201ENST00000541242 2494 ntBASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AL390755.1-201ENST00000623716 2027 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 FLJ16779-201ENST00000612722 7638 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AC067930.6-201ENST00000623257 4947 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AL645939.2-201ENST00000427340 991 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AP006288.1-201ENST00000446065 395 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AL079307.3-201ENST00000556114 283 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 KRT8P44-201ENST00000441609 1350 ntBASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF11Q9Y3C5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 SPDYE7P-202ENST00000420373 878 ntBASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF11Q9Y3C5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms