Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 PAUPAR-201ENST00000630360 2965 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 MIR600HG-201ENST00000449175 5984 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 COX5BP8-201ENST00000416911 349 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 ATP5G2P4-201ENST00000442175 420 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 GNAQP1-201ENST00000444815 1067 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 MIR6799-201ENST00000620297 69 ntBASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPH3AQ9Y2J0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ARSEP1-201ENST00000420443 635 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ZNF890P-202ENST00000530367 1156 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 SPDYE22P-201ENST00000582158 798 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC074044.1-201ENST00000609673 707 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AL662799.1-202ENST00000614205 422 ntBASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPH3AQ9Y2J0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SPDYE19P-201ENST00000338590 713 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms