Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 AC104794.3-201ENST00000566840 1248 ntBASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 SRD5A3P1-201ENST00000603021 949 ntBASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 AC023024.2-201ENST00000623561 1993 ntBASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
AP4E1Q9UPM8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 FLJ16779-201ENST00000612722 7638 ntBASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 MEIS3P1-201ENST00000495167 958 ntBASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 RNA5SP421-201ENST00000516864 134 ntBASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 AL158212.4-201ENST00000624062 1286 ntBASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP4E1Q9UPM8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC063926.3-201ENST00000624734 5658 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 MIR770-201ENST00000390219 98 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 INGX-202ENST00000489074 768 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC004790.1-201ENST00000612686 536 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4E1Q9UPM8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms