Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 AC060834.1-201ENST00000443027 2032 ntBASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 AC006529.1-201ENST00000459978 637 ntBASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 AC013553.1-201ENST00000560906 267 ntBASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 RN7SL602P-201ENST00000578326 324 ntBASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 RN7SL718P-201ENST00000581254 303 ntBASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIMBP3Q9UFD9 RN7SL288P-201ENST00000490496 291 ntBASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 F11R-204ENST00000537746 1245 ntTSL 2 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 MT2A-202ENST00000561491 581 ntTSL 2 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 ST5-261ENST00000626808 1071 ntTSL 5 BASIC23.77■■□□□ 1.4
RIMBP3Q9UFD9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 PIFO-201ENST00000369737 746 ntTSL 2 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 AL160191.2-201ENST00000603975 601 ntBASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 AC015912.3-201ENST00000619432 348 ntBASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIMBP3Q9UFD9 AC008764.6-201ENST00000595909 2069 ntBASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 OR2R1P-201ENST00000441404 914 ntBASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC23.75■■□□□ 1.39
RIMBP3Q9UFD9 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms